Some improvements here and there ver2

[dridk]

@bokic I fixed your code. There was a crash when reading compress file. e90c1a7110083223a7d2960b22717457995f0f86

'rawFile' is the compressed (.fastq.gz) file or plain text file (.fastq) . 'file' is the uncompress file or plain text file (*.fastq) .

To compute percent progression, we need to get the cursor position from the rawFile, not the KCompressFile. because I cannot have the total size of the KCompressfile.

[dridk]

and thx for your pull request. If you plan to do more, please do it on devel branch.

[bokic]

Guys, could you tell me where I could find some data files(I guess .fastq.gz or .fastq) so I can do some performance tests?

thanks..

[dridk]

You can find fastq file from 1000genomes project. There is a data portal : http://www.internationalgenome.org/data-portal/sample

Actually we open :

• fastq file
• fastq.gz file
• fastq.xz file
• fastq.bz2 file