mostly for issues pertaining to the content of the legumeinfo datastore; may also relate to characteristics of its user interface or managing the mirroring process to the legfed instance
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Arachis hypogaea Tifrunner Tifrunner.gnm2 and Tifrunner.gnm2.ann2 #160
Main steps for adding new genome and annotation collections
Genus/species/collection names:
What are the collection types and names? Example:
Arachis/hypogaea/genomes/Tifrunner.gnm2.J5K5
Arachis/hypogaea/annotations/Tifrunner.gnm2.ann2.PVFB
[x] Add collection(s) to the Data Store
[x] Validate the README(s)
[x] Update about_this_collection.yml
[x] Calculate AHRD functional annotations
[x] Calculate gene family assignments (.gfa)
[x] Add to pan-gene set
[ ] Load relevant mine
[ ] Add BLAST targets
[ ] Incorporate into GCV
[ ] Update the jekyll collections listing
[x] Update browser configs
[x] run BUSCO