lgpdevtools
commented
1 year ago Hi,
Thank you very much for your interest in using this tool. Please, send me a fasta file (with a sequence) that reproduce the warnings.
Best regards
Closed kayobianco closed 1 year ago
lgpdevtools
commented
1 year ago Hi,
Thank you very much for your interest in using this tool. Please, send me a fasta file (with a sequence) that reproduce the warnings.
Best regards
Hello everybody,
I'm trying to use the command "sraX -db ext -i "$input_dir" -o "$output_dir"" but several times the output is: Use of uninitialized value in exists at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 290. Use of uninitialized value in hash element at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 293. Use of uninitialized value in exists at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 290. Use of uninitialized value in hash element at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 293. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 304. Use of uninitialized value in string eq at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 316. Use of uninitialized value in concatenation (.) or string at /home/kayobianco/miniconda3/envs/sraX/bin/sraXlib/SNP.pm line 317.
Can you help me?