Make Decoil compatible with more SV callers outputs

madagiurgiu25 / decoil-pre

Reconstruct ecDNA from long-read data using Decoil tool

BSD 3-Clause "New" or "Revised" License

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Make Decoil compatible with more SV callers outputs #22

Open madagiurgiu25 opened 1 week ago

madagiurgiu25 commented 1 week ago

Here the aim is to make Decoil compatible with the SV callers outputs. Even though all SV callers give as output a VCF file, these differ slightly. Compatible with:

[ ] sniffles1
[ ] sniffles2
[ ] SAVANA etc