Closed uliboehme closed 5 years ago
On a regular basis InterPro is being run in Chado. Based on InterPro domains GO terms are automatically assigned with the evidence code IEA .(http://wiki.geneontology.org/index.php/Inferred_from_Electronic_Annotation_(IEA))
IEA evidence codes should be linked to InterPro. Currently GeneDB is shown as source for these GO terms. The InterPro link is present in column 8 of the GAF file.
Here is an example with two GO terms with IEA evidence codes. https://tools.wmflabs.org/genedb/#/gene/PF3D7_0810800
This is how it is currently shown in GeneDB: http://www.genedb.org/gene/PF3D7_0810800
Works now, example: https://www.genedb.org/#/gene/PF3D7_0810800 Items will be updated with the next run
On a regular basis InterPro is being run in Chado. Based on InterPro domains GO terms are automatically assigned with the evidence code IEA .(http://wiki.geneontology.org/index.php/Inferred_from_Electronic_Annotation_(IEA))
IEA evidence codes should be linked to InterPro. Currently GeneDB is shown as source for these GO terms. The InterPro link is present in column 8 of the GAF file.
Here is an example with two GO terms with IEA evidence codes. https://tools.wmflabs.org/genedb/#/gene/PF3D7_0810800
This is how it is currently shown in GeneDB: http://www.genedb.org/gene/PF3D7_0810800