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magnusmanske / genedb_wd

An interface implementation for GeneDB using Wikidata
Apache License 2.0
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Addition of EC numbers on the gene record page #26

Closed uliboehme closed 5 years ago

uliboehme commented 5 years ago

Is there a possibility to include EC numbers on the gene page?

Here are a few examples of genes with EC numbers: https://tools.wmflabs.org/genedb/#/gene/PF3D7_1453800

https://tools.wmflabs.org/genedb/#/gene/PF3D7_0810800

magnusmanske commented 5 years ago

Just to make sure, that would be "EC enzyme number", resolving to enzyme.expasy.org ?

There are two parts to this:

Should they be added/displayed for the gene or the protein(s)?

uliboehme commented 5 years ago

Thanks for looking into this! Yes, I meant enzyme numbers. It would be great to link to enzyme.expasy.org. This is also the link that PlasmoDB uses. Please see the following example: http://plasmodb.org/plasmo/app/record/gene/PF3D7_1453800#function-analysis

If possible I would add it to the gene section in the same area as the other links (currently there are links to PlasmoDB, Apollo and Wikidata).

magnusmanske commented 5 years ago

Display in interface is now in dev branch.

TO-DO: Add to Wikidata from gff/gaf

magnusmanske commented 5 years ago

Done