Update maf to gvcf

[zrm22]

Description

Update MAFToGVCF code to call the new version of biokotlin. The MAF file created by anchorwave 1.2.3 is different and this allows the user to input either older or current versions of MAF files.

Type of change

What type of changes does your code introduce? Put an x in boxes that apply.

• [x] CHANGE (fix or feature that would cause existing functionality to not work as expected)
• [ ] FEATURE (non-breaking change which adds functionality)
• [ ] BUGFIX (non-breaking change which fixes an issue)
• [ ] ENHANCEMENT (non-breaking change which improves existing functionality)
• [ ] NONE (if none of the other choices apply. Example, tooling, build system, CI, docs, etc.)

Checklist:

• [x] I have performed a self-review of my code
• [x] I have commented my code, particularly in hard-to-understand areas
• [x] I have updated relevant documentation

Changelog entry

Please add a one-line changelog entry below. This will be copied to the changelog file during the release process.

Update Maf to GVCF conversion by using biokotlin 0.19.

[codecov[bot]]

Codecov Report

Attention: Patch coverage is 92.30769% with 1 line in your changes missing coverage. Please review.

Project coverage is 82.99%. Comparing base (e5d92d3) to head (03b7fb1). Report is 54 commits behind head on main.

Files	Patch %	Lines
...kotlin/net/maizegenetics/phgv2/cli/CreateMafVcf.kt	92.30%	1 Missing :warning:

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #203 +/- ## ========================================== - Coverage 83.16% 82.99% -0.17% ========================================== Files 77 77 Lines 5228 5041 -187 Branches 836 834 -2 ========================================== - Hits 4348 4184 -164 + Misses 569 546 -23 Partials 311 311 ```

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