issues
search
mandricigor
/
imrep
ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
https://mandricigor.github.io/imrep/
28
stars
14
forks
source link
please report in the default mode
#22
Open
smangul1
opened
7 years ago
smangul1
commented
7 years ago
Let's report in the default mode for each CDR3
the average length of overlap for particular CDR3
flag if the CDR3 was assembled from 2 reads or one read also say mix in case both if thrue for a particular CDR3
average overlap with V gene - sum of on the left and right
average overlap with J gene - the sum on the left and right
relative abundance
Let's report in the default mode for each CDR3