marcelauliano / MitoHiFi

Find, circularise and annotate mitogenome from PacBio assemblies
MIT License
169 stars 29 forks source link

reviews #52

Closed marcelauliano closed 1 year ago

marcelauliano commented 1 year ago

Several changes to the GitHub repo to make it more professional and easy for others to use and improve code. (i) re-structured subdirectories (src, tests, environment), (ii) separated Docker containers: we have now a base Docker that contains all dependencies, and a Code Docker which gets created every time we change the code. (iii) we've created an implementation test that guarantees final results are not going to change when we implement changes to the code. (iv) fix MITOS bug from v3.01, now MITOS is running without problems because our Docker recipe install the exact MITOS version2.1.0.