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mennthor / awkde

Adaptive Width KDE with Gaussian Kernels
MIT License
39 stars 21 forks source link

Problem installing #3

Closed SylvainBreton closed 4 years ago

SylvainBreton commented 4 years ago

I am really interested in using your code.

When I try to install it using the command provided in read_me I run into an error. I'm on Mac Catalina and I want use annaconda to work on python. Here is the error I encounter when I try to install the package :

_> pip install [--user] -e ./awkde

ERROR: Exception: Traceback (most recent call last): File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/packaging/requirements.py", line 98, in init req = REQUIREMENT.parseString(requirement_string) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/pyparsing.py", line 1947, in parseString raise exc File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/pyparsing.py", line 1937, in parseString loc, tokens = self._parse(instring, 0) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/pyparsing.py", line 1677, in _parseNoCache loc, tokens = self.parseImpl(instring, preloc, doActions) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/pyparsing.py", line 4052, in parseImpl loc, exprtokens = e._parse(instring, loc, doActions) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/pyparsing.py", line 1681, in _parseNoCache loc, tokens = self.parseImpl(instring, preloc, doActions) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/pyparsing.py", line 3798, in parseImpl raise ParseException(instring, loc, self.errmsg, self) pip._vendor.pyparsing.ParseException: Expected stringEnd, found '[' (at char 11), (line:1, col:12)

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "/opt/anaconda3/lib/python3.7/site-packages/pip/_internal/cli/base_command.py", line 186, in _main status = self.run(options, args) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_internal/commands/install.py", line 301, in run wheel_cache File "/opt/anaconda3/lib/python3.7/site-packages/pip/_internal/cli/req_command.py", line 249, in populate_requirement_set wheel_cache=wheel_cache File "/opt/anaconda3/lib/python3.7/site-packages/pip/_internal/req/constructors.py", line 395, in install_req_from_line parts = parse_req_from_line(name, line_source) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_internal/req/constructors.py", line 346, in parse_req_from_line extras = convert_extras(extras_as_string) File "/opt/anaconda3/lib/python3.7/site-packages/pip/_internal/req/constructors.py", line 77, in convert_extras return Requirement("placeholder" + extras.lower()).extras File "/opt/anaconda3/lib/python3.7/site-packages/pip/_vendor/packaging/requirements.py", line 102, in init requirement_string[e.loc : e.loc + 8], e.msg pip.vendor.packaging.requirements.InvalidRequirement: Parse error at "'[--user]'": Expected stringEnd

zgana commented 4 years ago

The brackets around [--user] indicate that this is optional, depending on the desired behavior. If you have activated an anaconda environment, I believe you should not need this argument. instead, just pip install -e ./awkde. However I don't personally have experience using pip with anaconda.

See also the discussion under #2.

SylvainBreton commented 4 years ago

Ty this solved my issue. (I thought that I already tried this but I must have done something wrong then)