MiAIRR Sequencing Platform (SRA element) isn't right - Githubissues

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MiAIRR Sequencing Platform (SRA element) isn't right #999

Open graybeal opened 5 years ago

graybeal commented 5 years ago

The MiAIRR SRA element field for Sequencing Platform is not right, its example is for an instrument model and the Sequencing Platform should have a short list (about 8) of the platforms in a checklist. See the NCBI Human Tissue SRA element to see it done correctly.

It seems to me the Instrument Model is also missing from the MiAIRR SRA element.

MiAIRR SRA element: https://cedar.metadatacenter.org/elements/edit/https://repo.metadatacenter.org/template-elements/76b3a099-9126-48d6-89de-a8b799f42825

NCBI Human Tissue SRA element: https://cedar.metadatacenter.org/elements/edit/https://repo.metadatacenter.org/template-elements/eaba7288-4bb9-4348-846a-499ee31ef732

marcosmro commented 5 years ago

Find the valid values for 'Sequencing Platform' in the following file (see "Library and Platform Terms" tab): SRA_metadata_acc.xlsx