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metageni / SUPER-FOCUS

A tool for agile functional analysis of shotgun metagenomic data
GNU General Public License v3.0
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single-file query no longer working? #69

Closed ModelMEMS closed 2 years ago

ModelMEMS commented 3 years ago

I read in older documentation that focus had an option -m 0 to use a single fasta as input (rather than a directory). However, that appears to no longer work, as I get the error:

NotADirectoryError: [Errno 20] Not a directory: 'my_fasta.fa'

metageni commented 2 years ago

Sorry for taking too long to get back to you. You are correct; the latest version of the tool only takes a directory.