mrgsolve 1.0.8

SIGMA() is a new model macro which allows users to access on-diagonal elements of SIGMA in the model (e.g. SIGMA(2) in $ERROR) (#1051, #1052).
mrgsim() and mrgsim_q() gain an etasrc argument, allowing ETAs to be either simulated from OMEGA (new default and previously the only behavior) or taken from the input data set (new option), similar to the way parameters can be scraped from the data set (#1037).
@etas is a new option for use with the $CAPTURE block to let users name ETAs to be captured into the simulated output; for example, use @etas 1:last to capture all model ETAs in the simulated output (#1055).
Drop CXX_STD statement from Makevars file and DESCRIPTION to be consistent with current changes in R-devel; mrgsolve continues to require compiler capable of implementing C++11 standard, but this should be selected automatically by R (#1060).
mrgsolve now depends on R >= 3.6.2 (#1060).

Bugs Fixed

Fix bug when the path argument is used in the $NMXML or $NMEXT blocks; this bug was introduced through the @cppstem feature in version 1.0.7 (#1046, #1048).
Fix bug in mread_cache() where the project directory wasn't getting rendered properly when passing the complete path to the model specification file (#1056).

* using log directory 'd:/RCompile/CRANguest/R-devel/mrgsolve.Rcheck' * using R Under development (unstable) (2023-03-02 r83926 ucrt) * using platform: x86_64-w64-mingw32 (64-bit) * R was compiled by gcc.exe (GCC) 12.2.0 GNU Fortran (GCC) 12.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'mrgsolve/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'mrgsolve' version '1.0.8' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [11s] Note_to_CRAN_maintainers Maintainer: 'Kyle T Baron <kyleb@metrumrg.com>' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'mrgsolve' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 12.2.0' * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [1s] OK * checking whether the package can be unloaded cleanly ... [1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [18s] OK * checking Rd files ... [2s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking examples ... [13s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [24s] OK Running 'testthat.R' [24s] * checking PDF version of manual ... [17s] OK * checking HTML version of manual ... [23s] OK * checking for detritus in the temp directory ... OK * DONE Status: OK

* using log directory ‘/Volumes/PkgBuild/work/1677876927-adea95e0de05bffc/packages/big-sur-arm64/results/4.3/mrgsolve.Rcheck’ * using R Under development (unstable) (2022-12-04 r83401) * using platform: aarch64-apple-darwin20 (64-bit) * using session charset: UTF-8 * checking for file ‘mrgsolve/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘mrgsolve’ version ‘1.0.8’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘mrgsolve’ can be installed ... [23s/23s] OK * checking installed package size ... NOTE installed size is 7.7Mb sub-directories of 1Mb or more: libs 5.8Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [4s/4s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... OK * checking examples ... [3s/3s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [5s/6s] OK Running ‘testthat.R’ [5s/6s] * checking PDF version of manual ... [4s/4s] OK * DONE Status: 1 NOTE * using check arguments '--no-clean-on-error ' * elapsed time (check, wall clock): 1:02

metrumresearchgroup / mrgsolve

Release 1.0.8 #1061

mrgsolve 1.0.8

Bugs Fixed