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meyer-lab / tHMM

A general Python framework for using hidden Markov models on binary trees or cell lineage trees.
https://asmlab.org
MIT License
10 stars 1 forks source link

fonts for letters and some other stuff #864

Closed Farnazmdi closed 3 years ago

Farnazmdi commented 3 years ago

Some small changes to the figure titles/legend. etc. I had to build figure 4 because of the color of states 1 and 2 in the cartoon. I won't bore you with the details, but the order of colors when we plot the lineage tree needs to be re-organized only when we create figure 4 for consistency.

codecov[bot] commented 3 years ago

Codecov Report

Merging #864 (4eda13a) into master (2c3093d) will decrease coverage by 0.05%. The diff coverage is n/a.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #864      +/-   ##
==========================================
- Coverage   73.83%   73.78%   -0.06%     
==========================================
  Files          24       24              
  Lines        1915     1915              
==========================================
- Hits         1414     1413       -1     
- Misses        501      502       +1
Flag Coverage Δ
unittests 73.78% <ø> (-0.06%) :arrow_down:

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Impacted Files Coverage Δ
lineage/states/stateCommon.py 92.92% <0.00%> (-1.02%) :arrow_down:

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Farnazmdi commented 3 years ago

Yes, because of the color of states in the cartoon.

aarmey commented 3 years ago

Merging!