Error with BGC0000581 - Githubissues

mibig-secmet / mibig-json

Repository to track changes in MIBiG curation data stored in JSON format

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Open mmzdouc opened 11 months ago

mmzdouc commented 11 months ago

Affected BGC BGC0000581 microcin J25 biosynthetic gene cluster from Escherichia coli

Describe the error

The BGC product microcin J25 is wrongly depicted as head-to-tail cyclicized peptide. Wilson et al revised the structure as lassopeptide. The corrected structure (SMILES) should be as stated on PubChem (correctness checked manually).
The biosynthethic class is stated as RiPP Linaridin, but it should be RiPP (Lasso peptide)

mmzdouc commented 11 months ago

Has been addressed in the ongoing curation effort, will be fixed in the next MIBiG version.