gems case_or_control_participant has empty strings which should be NA. probably other places this happens as well, and we should update the loading script.
'WGS' should become something more accurate. maybe just 'metagenomics' ? maybe the collection name format should be something like 'assay: name' and theyd all become things like '16S (V4): Genus' and 'Shotgun metagenomics: Genus' ??
gems case_or_control_participant has empty strings which should be NA. probably other places this happens as well, and we should update the loading script.
'WGS' should become something more accurate. maybe just 'metagenomics' ? maybe the collection name format should be something like 'assay: name' and theyd all become things like '16S (V4): Genus' and 'Shotgun metagenomics: Genus' ??