microbiomedata / mixs

Minimum Information about any (X) Sequence” (MIxS) specification
https://microbiomedata.github.io/mixs/
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carbon terms for Bioscales (plus errors) #7

Open turbomam opened 2 years ago

turbomam commented 2 years ago

Bioscales has a carbon column for their soil samples, expressed in percent

Here are the existing MIxS terms containing 'car'

Note agriculture's 'tot_car' vs microbial mat/biofilm's & sediment's 'tot_carb'

Environmental package Structured comment name
microbial mat/biofilm bacteria_carb_prod
sediment bacteria_carb_prod
water bacteria_carb_prod
air carb_dioxide
built environment carb_dioxide
air carb_monoxide
microbial mat/biofilm carb_nitro_ratio
sediment carb_nitro_ratio
water carb_nitro_ratio
hydrocarbon resources-cores diss_carb_dioxide
hydrocarbon resources-fluids/swabs diss_carb_dioxide
microbial mat/biofilm diss_carb_dioxide
miscellaneous natural or artificial environment diss_carb_dioxide
sediment diss_carb_dioxide
water diss_carb_dioxide
hydrocarbon resources-cores diss_inorg_carb
hydrocarbon resources-fluids/swabs diss_inorg_carb
microbial mat/biofilm diss_inorg_carb
miscellaneous natural or artificial environment diss_inorg_carb
sediment diss_inorg_carb
water diss_inorg_carb
hydrocarbon resources-cores diss_org_carb
hydrocarbon resources-fluids/swabs diss_org_carb
microbial mat/biofilm diss_org_carb
sediment diss_org_carb
water diss_org_carb
built environment height_carper_fiber
microbial mat/biofilm org_carb
miscellaneous natural or artificial environment org_carb
sediment org_carb
water org_carb
microbial mat/biofilm part_org_carb
sediment part_org_carb
water part_org_carb
agriculture root_med_carbon
food-farm environment root_med_carbon
plant-associated root_med_carbon
agriculture tot_car
microbial mat/biofilm tot_carb
sediment tot_carb
agriculture tot_org_carb
food-farm environment tot_org_carb
microbial mat/biofilm tot_org_carb
sediment tot_org_carb
soil tot_org_carb
water tot_part_carb