microsoft / ga4gh-beacon

GA4GH Beacon at Microsoft
MIT License
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Load test data into postgres #7

Closed yuliadub closed 2 months ago

yuliadub commented 2 months ago

Do this for individuals and datasets models. Can use test data from this repo: https://github.com/EGA-archive/beacon2-ri-api/tree/master/deploy/data

Need to:

We will need posgtes to have the models for individuals and datasets tables before these can be imported in

yuliadub commented 2 months ago

https://www.cyberciti.biz/faq/how-to-convert-json-to-csv-using-linux-unix-shell/

yuliadub commented 2 months ago

ended up generating test data of our own, for a limited model of individuals and datsets to ensure we can easily demo, will not use the Json files from ega after all.

yuliadub commented 2 months ago

@sergiygetlin is looking into how easy it will be to load the manually generated test data into the db via liquidbase (so we dont have to do it manually or with a script, we just get it with the localhost postgres db)

yuliadub commented 2 months ago

https://github.com/microsoft/ga4gh-beacon/pull/21