I tried to convert from a HD5ad file to h5seurat using convert function in seurat-disk package, but it failed with this error message "Error: Cannot find feature names in this H5AD file"

mojaveazure / seurat-disk

Interfaces for HDF5-based Single Cell File Formats

https://mojaveazure.github.io/seurat-disk

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I tried to convert from a HD5ad file to h5seurat using convert function in seurat-disk package, but it failed with this error message "Error: Cannot find feature names in this H5AD file" #124

Open peralesvilchezl opened 2 years ago

peralesvilchezl commented 2 years ago

I tried to convert from a HD5ad file to h5seurat using convert function in seurat-disk package, but it failed with this error message "Error: Cannot find feature names in this H5AD file" THe H5ad files were downloaded from. https://www.covid19cellatlas.org/ Can you help?

Originally posted by @ohne416 in https://github.com/mojaveazure/seurat-disk/issues/1#issuecomment-691416799

apanda1001 commented 2 years ago

I have the same issue too, the datasets I am using is after conversion to h5ad from the following website.
The method I am trying to use has been mentioned in this man page The error: