mojaveazure / seurat-disk

Interfaces for HDF5-based Single Cell File Formats
https://mojaveazure.github.io/seurat-disk
GNU General Public License v3.0
156 stars 50 forks source link

error in curl::curl_download() step:Failed to open file pbmc3k_final.h5ad.curltmp. #158

Open Sophia409 opened 1 year ago

Sophia409 commented 1 year ago

Hi,

I'm running into an error in curl::curl_download() step.

> url <- "https://seurat.nygenome.org/pbmc3k_final.h5ad"
> curl::curl_download(url, basename(url))
Error in curl::curl_download(url, basename(url)) :
  Failed to open file pbmc3k_final.h5ad.curltmp.
> sessionInfo()
R version 4.1.2 (2021-11-01)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: CentOS Linux 7 (Core)

Matrix products: default
BLAS/LAPACK: /usr/lib64/libopenblasp-r0.3.3.so

locale:
 [1] LC_CTYPE=zh_CN.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=zh_CN.UTF-8        LC_COLLATE=zh_CN.UTF-8
 [5] LC_MONETARY=zh_CN.UTF-8    LC_MESSAGES=zh_CN.UTF-8
 [7] LC_PAPER=zh_CN.UTF-8       LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=zh_CN.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

loaded via a namespace (and not attached):
[1] compiler_4.1.2 curl_5.0.0

Could you give me some help? Many thanks.

Regards, Sophia