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molgenis
/
systemsgenetics
Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool
https://github.com/molgenis/systemsgenetics/wiki
GNU General Public License v3.0
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Change download location as jenkins build is down
#573
npklein
closed
4 years ago
0
Add enters after header
#572
npklein
closed
4 years ago
0
GenotypeIO update
#571
CAWarmerdam
closed
4 years ago
0
Update in BGEN writer
#570
CAWarmerdam
closed
4 years ago
0
VCF Probability fall back from phased to unphased
#569
Bonder-MJ
closed
4 years ago
0
Multipart genotype files
#568
Bonder-MJ
closed
4 years ago
0
Updated BGEN writer
#567
CAWarmerdam
closed
4 years ago
0
Updated BGEN writer
#566
CAWarmerdam
closed
4 years ago
0
Update LICENSE
#565
npklein
closed
4 years ago
0
Add license
#564
npklein
closed
4 years ago
0
Add LICENSE
#563
npklein
closed
4 years ago
0
Clarifying the license?
#562
tomsing1
closed
4 years ago
1
Minor updates
#561
Bonder-MJ
closed
4 years ago
0
One last minor fix
#560
PatrickDeelen
closed
4 years ago
1
Fix for parent pom of Decon-eQTL not being found
#559
CAWarmerdam
closed
4 years ago
0
Fix for mvn site goal
#558
CAWarmerdam
closed
4 years ago
0
Fixed failed test when building Genotype-IO module
#557
CAWarmerdam
closed
4 years ago
0
Update BgenixReaderTest.java
#556
PatrickDeelen
closed
4 years ago
0
Fix jenkins?
#555
PatrickDeelen
closed
4 years ago
0
Eosinophils
#554
antgomo
closed
4 years ago
1
Added bgenix index file for the 16bits bgen example file
#553
CAWarmerdam
closed
4 years ago
0
Update pom.xml
#552
PatrickDeelen
closed
4 years ago
1
Added support for the Oxford Binary GEN format
#551
CAWarmerdam
closed
4 years ago
0
Code sync
#550
harmjanwestra
closed
5 years ago
0
DEPICT2; Genetica-lib; fixes
#549
PatrickDeelen
closed
5 years ago
0
Fix error where variable datasets is used without being set
#548
npklein
closed
5 years ago
0
Create LICENSE
#547
dennishendriksen
closed
5 years ago
0
Replace org.molgenis.vcf with vcf-io artifact dependency
#546
dennishendriksen
closed
5 years ago
0
update readme to make more clear where to get simulated data
#545
npklein
closed
5 years ago
0
Fixes and tweaks in BinaryMetaAnalyzer, MetaQTL etc
#544
harmjanwestra
closed
5 years ago
0
Post release version bump
#543
PatrickDeelen
closed
5 years ago
0
Version bump to make release
#542
PatrickDeelen
closed
5 years ago
0
GADO commandline + others
#541
PatrickDeelen
closed
5 years ago
0
Fix ojAlgo implementation + DoubleMatrix appender
#540
harmjanwestra
closed
5 years ago
0
DEPICT2 + WeightedCorrelations including unit test
#539
PatrickDeelen
closed
5 years ago
0
Improvements to matrix, including fast correlating columns of 2 matrices + DEPICT2
#538
PatrickDeelen
closed
5 years ago
0
Resolve merge conflict and some depict2
#537
PatrickDeelen
closed
5 years ago
0
Some code cleanup and implementation of a newer PCA lib
#536
harmjanwestra
closed
5 years ago
0
this should fix the failing eQTL tests
#535
harmjanwestra
closed
5 years ago
1
Multiple minor fixes, added legacy code, fix jenkins test for eqtl mapping pipeline
#534
harmjanwestra
closed
5 years ago
0
Fix build failure on jenkins
#533
PatrickDeelen
closed
5 years ago
0
Lots of stuff, including binary read and save for doublematrixdataset
#532
PatrickDeelen
closed
5 years ago
0
Update README.md
#531
harmjanwestra
closed
5 years ago
0
Fix an issue with removal of PCs correlated with genetic variants
#530
harmjanwestra
closed
5 years ago
0
Minor fixes in EMP
#529
harmjanwestra
closed
5 years ago
0
Create 1000 random phenotype data for GWAS
#528
Sophiemulc
closed
5 years ago
0
Add option for OLS, minor bug fix, refractor simulation code
#527
npklein
closed
5 years ago
0
Fixes for pcaoptimum step + other stuff
#526
harmjanwestra
closed
5 years ago
0
fixed link
#525
npklein
closed
5 years ago
0
Fixed typo
#524
raguirreg
closed
6 years ago
0
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