monarch-initiative / biolink-api

API for linked biological knowledge
https://api.monarchinitiative.org/api/
BSD 3-Clause "New" or "Revised" License
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Update sim routes; add evidence table route #314

Closed kshefchek closed 5 years ago

kshefchek commented 5 years ago

Accompanies https://github.com/biolink/ontobio/pull/366

Adds an evidence table endpoint (which is still graph-like, but can be represented as either a table or graph)

For sim endpoints, allows for multiple algorithms/metrics depending on the upstream service. For example for owlsim2 you can switch between phenodigm, resnik, symmetric resnik, jaccard, simGIC. Also adds an argument for specifying if a list of identifiers are all phenotypic features.

Fixes https://github.com/biolink/biolink-api/issues/295

For more documentation see https://github.com/biolink/ontobio/pull/366