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mpi2
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impc-etl
IMPC ETL Process
Apache License 2.0
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Adding special rule to mark EYE_003/EYE_092_002 stats results as NotPr…
#173
ficolo
closed
3 years ago
0
Adding WMPTERM extraction to open stats extractor
#172
ficolo
closed
3 years ago
0
Adding mapping for windowing stats results parquet
#171
ficolo
closed
3 years ago
0
Adding support for Windowing data load
#170
ficolo
closed
3 years ago
0
Update parquet2solr version
#169
ficolo
closed
3 years ago
0
Update parquet2solr version
#168
ficolo
closed
3 years ago
0
Update parquet2solr jar to support new pipeline core field
#167
ficolo
closed
3 years ago
0
Change observations_id field to be managed as a RAW_DATA field
#166
ficolo
closed
3 years ago
0
Adding temporal filtering for EYE_003/EYE_092_002 stats results
#165
ficolo
closed
3 years ago
0
Fix Datasource extraction and add _sourcePhenotypingStatus
#164
ficolo
closed
3 years ago
0
Change special dates parsing to use RLIKE instead of ILIKE
#163
ficolo
closed
3 years ago
0
Add source_phenotyping_status field to observations
#162
ficolo
closed
3 years ago
0
Adding regex for extraction especial date of experiments
#161
ficolo
closed
3 years ago
0
<BUGFIX> ImpcCopyIndexParts: Restrict threading
#160
jmason-ebi
closed
3 years ago
0
Adding daily cfg generation and daily submit make commands
#159
ficolo
closed
3 years ago
0
Adding daily cfg generation and daily submit make commands
#158
ficolo
closed
3 years ago
0
Adding LEGACY flags for datetime parsing policy
#157
ficolo
closed
3 years ago
0
Fix date parsing pattern
#156
ficolo
closed
3 years ago
0
Casting special dates to Spark date type
#155
ficolo
closed
3 years ago
0
Adding blood collection and date of sacrifice support
#154
ficolo
closed
3 years ago
0
Adding support for date of blood collection and date of sacrifice
#153
ficolo
closed
3 years ago
0
Adding special logic for BW and age generation WIP #123
#152
ficolo
closed
3 years ago
0
Fix specimen_id generation
#151
ficolo
closed
3 years ago
0
Change glob to spark API on DCC extractor
#150
ficolo
closed
3 years ago
0
Change glob to spark API on DCC extractor
#149
ficolo
closed
3 years ago
0
Change glob to spark API on DCC extractor
#148
ficolo
closed
3 years ago
0
Change glob to spark API on DCC extractor
#147
ficolo
closed
3 years ago
0
Change glob to spark API on DCC extractor
#146
ficolo
closed
3 years ago
0
Change glob to spark API on DCC extractor
#145
ficolo
closed
3 years ago
0
Changing DCC Extractor GLOB expression to support new directory
#144
ficolo
closed
3 years ago
0
IMPC DR15: Update Apache Spark version to 3.1.2
#143
ficolo
closed
3 years ago
0
Changing DCC Extractor GLOB expression
#142
ficolo
closed
3 years ago
0
Adding documentation to makefile
#141
ficolo
closed
3 years ago
0
Adding luigi template to .gitignore
#140
ficolo
closed
3 years ago
0
Adding createLuigiCfg command
#139
ficolo
closed
3 years ago
0
Adding createLuigiCfg command
#138
ficolo
closed
3 years ago
0
Adding PYTHON variable dependency on make for creating venv
#137
ficolo
closed
3 years ago
0
Add pip update to make file
#136
ficolo
closed
3 years ago
0
Change python to python3 on the Make file
#135
ficolo
closed
3 years ago
0
Addin prod requirements
#134
ficolo
closed
3 years ago
0
Adding template for luigi.cfg and adding Makefile command for generating the Input data bundle
#133
ficolo
closed
3 years ago
0
IMPC DR15.0: Document the DR process
#132
ficolo
closed
3 years ago
0
IMPC DR15.0: Add make command to generate luigi.cfg
#131
ficolo
closed
3 years ago
0
IMPC DR15.0: Fix make command to build the data input
#130
ficolo
closed
3 years ago
0
Trying to sync up my fork
#129
ficolo
closed
3 years ago
0
Adding API Bundle loader
#128
ficolo
closed
3 years ago
0
Adding Bundle loader
#127
ficolo
closed
3 years ago
0
check specimen_id generation
#126
ficolo
closed
3 years ago
0
Updates DR 14
#125
ficolo
closed
3 years ago
0
Adding observation ids to stats results
#124
ficolo
closed
3 years ago
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