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msberends / AMR

Functions to simplify and standardise antimicrobial resistance (AMR) data analysis and to work with microbial and antimicrobial properties by using evidence-based methods, as described in https://doi.org/10.18637/jss.v104.i03.
https://msberends.github.io/AMR/
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Breakpoints prefer PK/PD #106

Closed msberends closed 1 year ago

msberends commented 1 year ago

This should be the same and there are not:

as.sir(x = as.mic(c(0.125, 0.5, 1, 2, 4)),
       mo = "B_STRPT_PNMN",
       ab = "AMP",
       guideline = "EUCAST 2020")

as.sir(x = as.mic(c(0.125, 0.5, 1, 2, 4)),
       mo = "B_STRPT_PNMN",
       ab = "AMP",
       guideline = "EUCAST 2020",
       include_PKPD = FALSE)