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natverse
/
rcatmaid
R package providing API access to the CATMAID web image annotation tool
https://natverse.github.io/rcatmaid
GNU General Public License v3.0
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Find catmaidneuron somata
#128
alexanderbates
closed
5 years ago
0
Fixes #124
#127
SridharJagannathan
closed
5 years ago
1
catmaid_get_time_invested() should handle skids that do not have any connector ids or tags
#126
SridharJagannathan
closed
5 years ago
0
OmitFailures argument for catmaid_get_treenodes_detail()
#125
mmc46
closed
5 years ago
6
Correct formatting and add examples to catmaid_get_time_invested()
#124
mmc46
closed
5 years ago
1
catmaid_error_check should be more permissive about result structure
#123
jefferis
closed
5 years ago
0
Feature/input file name
#122
SridharJagannathan
closed
5 years ago
0
Feature/timeinvestedapi
#121
SridharJagannathan
closed
5 years ago
4
Put url into InputFileName?
#120
jefferis
closed
5 years ago
6
Mockhttptest
#119
SridharJagannathan
closed
5 years ago
6
First batch of general CATMAID related functions form catnat
#118
alexanderbates
closed
5 years ago
2
asynchronous requests to CATMAID API
#117
jefferis
opened
5 years ago
0
Bug in get_volumelist()
#116
jefferis
closed
5 years ago
1
Develop
#115
SridharJagannathan
closed
5 years ago
3
Support for 64 bit integers as skids
#114
jefferis
opened
5 years ago
7
catmaid_query_connected silently ignores <5 confidence connections
#113
schlegelp
closed
5 years ago
0
Develop
#112
SridharJagannathan
closed
5 years ago
0
Test cases failing when running command devtools::test()
#111
SridharJagannathan
closed
5 years ago
1
Examples failing when using catmaid_login()
#110
SridharJagannathan
closed
5 years ago
2
Wrong name for post_skid output in catmaid_get_connectors_between()
#109
mmc46
closed
5 years ago
0
Support for advanced curl options e.g. to bypass SSL certificate issues
#108
jefferis
closed
5 years ago
0
partner_treenode_id in catmaid_get_connector_table() is own skid
#107
mmc46
closed
5 years ago
3
catmaid_get_connector_table can return duplicate rows
#106
jefferis
closed
5 years ago
0
catmaid_query_by_annotation does not pass on pid at some point
#105
jefferis
closed
5 years ago
4
catmaid_rename_neuron do longer works
#104
alexanderbates
closed
5 years ago
4
What to do when CATMAID has *bad* version string
#103
jefferis
closed
5 years ago
9
Support new catmaid volume API return format
#102
jefferis
closed
6 years ago
0
catmaid_get_treenode_table API endpoint no longer exists
#101
jefferis
closed
6 years ago
0
catmaid_query_by_name does not treat query as regex
#100
jefferis
closed
6 years ago
1
read_catmaid_selection has rowname mismatch
#99
jefferis
closed
6 years ago
0
Sort neuron tags
#98
jefferis
closed
6 years ago
0
Add support for fetching treenode details by label / skid
#97
jefferis
closed
5 years ago
4
Expose function to count cell bodies
#96
jefferis
closed
6 years ago
1
Add functions to set node labels (aka tags)
#95
jefferis
closed
6 years ago
2
Add function to get node information many nodes at once
#94
jefferis
closed
6 years ago
0
teach catmaid_get_connectors_between to find names for pre/post skids
#93
jefferis
closed
6 years ago
2
Teach catmaid_get_neuronnames to handle dups efficiently
#92
jefferis
closed
6 years ago
0
catmaid_login cannot take certain arguments
#91
alexanderbates
closed
6 years ago
3
bug in catmaid_skids error message
#90
jefferis
closed
6 years ago
0
make exact annotation search the default for catmaid_skids
#89
jefferis
closed
6 years ago
0
Not plotting soma after converting to dotprops
#88
mmc46
opened
6 years ago
3
catmaid_get_connector_table stopped working.
#87
jefferis
closed
6 years ago
0
Prefer "soma" tag over alternatives if present
#86
jefferis
closed
7 years ago
1
catmaid_add_volume ignores pid
#85
jefferis
closed
7 years ago
2
Teach catmaid_login to handle sites that do not need a login
#84
jefferis
closed
7 years ago
1
Allow ashape3d objects to be added to catmaid natively
#83
jefferis
opened
7 years ago
0
Add function to get volumes from catmaid
#82
jefferis
closed
7 years ago
0
query_by_neuron_or_annotation adds empty annotations attribute
#81
jefferis
closed
7 years ago
1
catmaid_login should prefer environment variables
#80
jefferis
closed
7 years ago
0
catmaid_get_compact_skeleton should return list of vectors
#79
jefferis
closed
7 years ago
0
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