ncats / bard

Sources for the BioAssay Research Database
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Very large request results in SolrException: Bad Request #54

Closed jerilevine closed 11 years ago

jerilevine commented 11 years ago

To be honest, I'm not sure what the priority of something like this would be as most people likely wouldn't select this many facets -- but once it's out there in the public, I guess you never know. Do you know what is the maximum allowed size of a request?

This one, for instance, fails (sorry for upcoming wall of text):

http://bard.nih.gov/api/v15/search/projects/?q=cancer&filter=fq(target_name:%22Putative+hydrolase+RBBP9%22),fq(target_name:%22Pyruvate+kinase+isozymes+M1%2FM2%22),fq(target_name:%22Thyrotropin+receptor%22),fq(target_name:%22Apoptotic+protease-activating+factor+1%22),fq(target_name:%22C-C+chemokine+receptor+type+6%22),fq(target_name:%22Galanin+receptor+type+2%22),fq(target_name:%22Heat+shock+factor+protein+1%22),fq(target_name:%22Integrin+alpha-4%22),fq(target_name:%22Regulator+of+G-protein+signaling+4%22),fq(target_name:%22Runt-related+transcription+factor+1%22),fq(target_name:%22Signal+transducer+and+activator+of+transcription+1-alpha%2Fbeta%22),fq(target_name:%22Signal+transducer+and+activator+of+transcription+3%22),fq(target_name:15-hydroxyprostaglandin+dehydrogenase+%5BNAD%28%2B%29%5D),fq(target_name:%22ATP-binding+cassette+sub-family+B+member+6%2C+mitochondrial%22),fq(target_name:%22Abhydrolase+domain-containing+protein+FAM108B1%22),fq(target_name:%22Acyl-protein+thioesterase+1%22),fq(target_name:%22Acyl-protein+thioesterase+2%22),fq(target_name:%22Acylamino-acid-releasing+enzyme%22),fq(target_name:%22Alkaline+phosphatase%2C+placental-like%22),fq(target_name:%22Alkaline+phosphatase%2C+tissue-nonspecific+isozyme%22),fq(target_name:%22Arachidonate+12-lipoxygenase%2C+12S-type%22),fq(target_name:%22Arachidonate+15-lipoxygenase%22),fq(target_name:%22Arachidonate+15-lipoxygenase+B%22),fq(target_name:%22Bcl-2-like+protein+1%22),fq(target_name:%22Bcl-2-like+protein+11%22),fq(target_name:%22Bloom+syndrome+protein%22),fq(target_name:%22C-X-C+chemokine+receptor+type+6%22),fq(target_name:%22CAAX+prenyl+protease+2%22),fq(target_name:%22Caspase-1%22),fq(target_name:%22Caspase-3%22),fq(target_name:%22Collagenase+3%22),fq(target_name:%22Cysteine+protease+ATG4B%22),fq(target_name:%22DNA+%28cytosine-5%29-methyltransferase+1%22),fq(target_name:%22DNA+dC-%3EdU-editing+enzyme+APOBEC-3G%22),fq(target_name:%22DNA-%28apurinic+or+apyrimidinic+site%29+lyase%22),fq(target_name:%22Dual+specificity+protein+kinase+CLK4%22),fq(target_name:%22Dual+specificity+protein+phosphatase+3%22),fq(target_name:%22E3+ubiquitin-protein+ligase+XIAP%22),fq(target_name:%22Ephrin+type-B+receptor+4%22),fq(target_name:%22Epidermal+growth+factor+receptor%22),fq(target_name:%22Epstein-Barr+nuclear+antigen+1%22),fq(target_name:%22Estrogen+receptor%22),fq(target_name:%22Eukaryotic+translation+initiation+factor+4H%22),fq(target_name:%22Focal+adhesion+kinase+1%22),fq(target_name:%22GTPase+HRas%22),fq(target_name:%22Heat+shock+protein+HSP+90-alpha%22),fq(target_name:%22Hemoglobin+subunit+beta%22),fq(target_name:%22Histone+acetyltransferase+KAT2A%22),fq(target_name:%22Histone-lysine+N-methyltransferase+EHMT2%22),fq(target_name:%22Induced+myeloid+leukemia+cell+differentiation+protein+Mcl-1%22),fq(target_name:%22Krueppel-like+factor+5%22),fq(target_name:%22Large+T+antigen%22),fq(target_name:%22Lysine-specific+demethylase+4E%22),fq(target_name:%22Mediator+of+RNA+polymerase+II+transcription+subunit+9%22),fq(target_name:%22Menin%22),fq(target_name:%22Microphthalmia-associated+transcription+factor%22),fq(target_name:%22Mitochondrial+import+inner+membrane+translocase+subunit+TIM10%22),fq(target_name:%22Multidrug+resistance+protein+1%22),fq(target_name:%22N-formyl+peptide+receptor+2%22),fq(target_name:%22NADPH+oxidase+1%22),fq(target_name:%22Neuropeptide+Y+receptor+type+2%22),fq(target_name:%22Nuclear+receptor+coactivator+1%22),fq(target_name:%22Nuclear+receptor+coactivator+3%22),fq(target_name:%22Nuclear+receptor+subfamily+0+group+B+member+1%22),fq(target_name:%22Nuclear+receptor+subfamily+5+group+A+member+2%22),fq(target_name:%22Nucleotide-binding+oligomerization+domain-containing+protein+1%22),fq(target_name:%22Nucleotide-binding+oligomerization+domain-containing+protein+2%22),fq(target_name:%22Platelet-activating+factor+acetylhydrolase+2%2C+cytoplasmic%22),fq(target_name:%22Polyadenylate-binding+protein+1%22),fq(target_name:%22Polypyrimidine+tract-binding+protein+1%22),fq(target_name:%22Potassium+channel+subfamily+K+member+9%22),fq(target_name:%22Potassium+voltage-gated+channel+subfamily+H+member+2%22),fq(target_name:%22Probable+DNA+dC-%3EdU-editing+enzyme+APOBEC-3A%22),fq(target_name:%22Prolyl+endopeptidase-like%22),fq(target_name:%22Protein+Mdm4%22),fq(target_name:%22Protein+fosB%22),fq(target_name:%22Protein+phosphatase+1+regulatory+subunit+15A%22),fq(target_name:%22Pyruvate+kinase%22),fq(target_name:%22Serine+protease+HTRA1%22),fq(target_name:%22Serine+protease+Rv3671c%22),fq(target_name:%22Serine%2Fthreonine-protein+kinase+33%22),fq(target_name:%22Serine%2Fthreonine-protein+kinase+mTOR%22),fq(target_name:%22Serine%2Fthreonine-protein+phosphatase+5%22),fq(target_name:%22Serine%2Fthreonine-protein+phosphatase+PP1-alpha+catalytic+subunit%22),fq(target_name:%22Sphingosine+1-phosphate+receptor+2%22),fq(target_name:%22Steroidogenic+factor+1%22),fq(target_name:%22Stress-induced-phosphoprotein+1%22),fq(target_name:%22Transitional+endoplasmic+reticulum+ATPase%22),fq(target_name:%22Tumor+necrosis+factor+ligand+superfamily+member+10%22),fq(target_name:%22Tyrosine-protein+kinase+ABL1%22),fq(target_name:%22Tyrosine-protein+kinase+JAK2%22),

rajarshi commented 11 years ago

The request runs fine, but doesn't return results. Is that the issue? Or is it that the request fails?

jerilevine commented 11 years ago

It used to give me a SolrException, but doesn't anymore. I'm going to close this for now, I guess. Thanks.