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ncbo / bioportal-project

Serves to consolidate (in Zenhub) all public issues in BioPortal
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FHIR may have IRIs for UMLS terms #144

Open graybeal opened 4 years ago

graybeal commented 4 years ago

A Slack communication with Jerven Bolleman of SIB / SwissProt:

[My use of BioPortal is] Finding the correct IRIs of important shared vocabularies Negative, is non official ontologies being above or missleading e.g. http://purl.bioontology.org/ontology/SNOMEDCT/123037004 Instead of http://snomed.info/id/123037004

browser.ihtsdotools.orgbrowser.ihtsdotools.org SNOMED International Browser SNOMED International SNOMED CT Browser

John Graybeal 12:06 PM ewww. what's the pattern of that—lots in SNOMED, or in many UMLS ontologies, or just scattered occurrences?

Jerven Bolleman 12:07 PM Basically, with FHIR. Loinc etc. have official supported IRI patterns With supported infra Maybe not a bioportal issue (edited)

graybeal commented 4 years ago

Wonder if these could be pushed back into UMLS? (And what would the implications be for BioPortal, if the identifiers for all those terms changed? Might be unfortunate.)