Closed sstevenshang closed 6 years ago
Finished integrating LASSO into EpiQuant.
Run it the same way as SPAEML with --lasso flag.
--lasso
Example: spark-submit --deploy-mode client --master local --class Main target/SPAEML-0.0.1-jar-with-dependencies.jar StepwiseModelSelection --epiq src/test/resources/Genotypes/10.Subset.n=300.epiq -P src/test/resources/Phenotypes/Simulated.Data.1.Reps.Herit.0.92_n=300.epiq --lasso -o out
spark-submit --deploy-mode client --master local --class Main target/SPAEML-0.0.1-jar-with-dependencies.jar StepwiseModelSelection --epiq src/test/resources/Genotypes/10.Subset.n=300.epiq -P src/test/resources/Phenotypes/Simulated.Data.1.Reps.Herit.0.92_n=300.epiq --lasso -o out
This will output JSON files suffixed with .lasso in the output directory.
.lasso
Finished integrating LASSO into EpiQuant.
Run it the same way as SPAEML with
--lassoflag.Example:
spark-submit --deploy-mode client --master local --class Main target/SPAEML-0.0.1-jar-with-dependencies.jar StepwiseModelSelection --epiq src/test/resources/Genotypes/10.Subset.n=300.epiq -P src/test/resources/Phenotypes/Simulated.Data.1.Reps.Herit.0.92_n=300.epiq --lasso -o outThis will output JSON files suffixed with
.lassoin the output directory.