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neherlab / nextalign

🧬 Viral genome reference alignment
MIT License
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perf: add benchmarks for stripInsertions() #4

Closed ivan-aksamentov closed 3 years ago

ivan-aksamentov commented 3 years ago

Adds becnhmarks for the insertion stripping step. Turns out it is surprisingly fast (~2800 seq/s), considering all the string concatenation involved.