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nel-lab / mesmerize-core

High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
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Update install instructions for caimanmanager #228

Closed rly closed 1 year ago

rly commented 1 year ago

Fix #227

rly commented 1 year ago

The workflows also use caimanmanager.py install after a git clone of CaImAn. I'm not sure why that works and running caimanmanager.py install after a conda install of CaImAn doesn't.

rly commented 1 year ago

Oh CaImAn 1.9.16 was released 5 days ago. The same errors are observed in https://github.com/nel-lab/mesmerize-core/actions/runs/6428346009/job/17455374529?pr=226 https://github.com/nel-lab/mesmerize-core/actions/runs/6428346005/job/17455374662?pr=226