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neurodata / ndgrutedb

Pipeline and tools for estimating human connectomes from Diffusion, Structural, and Functional MRI
http://neurodata.io
Apache License 2.0
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Cythonize downsample #76

Closed disa-mhembere closed 8 years ago

disa-mhembere commented 9 years ago

Accelerate loops in downsample

disa-mhembere commented 8 years ago

Overall Improvement is 40% reduction in time. This is can be improved. The unavoidable bottleneck is building an igraph.