neuropoly / axonseg

Segment axon and myelin from microscopy data. Written in Matlab.
MIT License
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Check toolboxes needed to run AxonSeg on Matlab #34

Closed alzaia closed 7 years ago

alzaia commented 7 years ago

Undefined function 'fitcdiscr' for input arguments of type 'double'.

Error in Discr_Analysis (line 14) classifier = fitcdiscr(X,species,'DiscrimType',type,'Cost',Cost_matrix);

Error in as_axonSeg_make_DA_classifier (line 53) [classifier_init,~] = Discr_Analysis(Stats_1_used, Stats_2_used, [0, 1; 10, 0],type);

Error in SegmentationGUI>DiscriminantAnalysis_Callback (line 1654) [classifier, handles.parameters,ROC_values] = as_axonSeg_make_DA_classifier(handles.data.Step2_seg,handles.data.DA_final,handles.data.Step1,...

Error in gui_mainfcn (line 95) feval(varargin{:});

Error in SegmentationGUI (line 48) gui_mainfcn(gui_State, varargin{:});

Error in @(hObject,eventdata)SegmentationGUI('DiscriminantAnalysis_Callback',hObject,eventdata,guidata(hObject))

14 classifier = fitcdiscr(X,species,'DiscrimType',type,'Cost',Cost_matrix); K>>

Undefined function 'csaps' for input arguments of type 'double'.

Error in myelinInitialSegmention>computeProfileEndpoint (line 242) pp = csaps(th,yy, 0.99);

Error in myelinInitialSegmention (line 74) [radialProfileStartpoint, radialProfileEndpoint] = computeProfileEndpoint(fliplr(currentAxonBoundary{1}), radialProfileLength, numAnglesRadialProfile);

Error in SegmentationGUI>MyelinSeg_Callback (line 1422) [handles.data.seg] = myelinInitialSegmention(handles.data.Step1, tmp, backBW,0,1,get(handles.PixelSize,'Value'));

Error in gui_mainfcn (line 95) feval(varargin{:});

Error in SegmentationGUI (line 48) gui_mainfcn(gui_State, varargin{:});

Error in @(hObject,eventdata)SegmentationGUI('MyelinSeg_Callback',hObject,eventdata,guidata(hObject))

242 pp = csaps(th,yy, 0.99); K>>

tanguyduval commented 7 years ago

same as issue #13