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neurosynth / ACE

Tools for automatic extraction of activation coordinates from published neuroimaging articles.
MIT License
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Extraction missing activations #18

Open jdkent opened 6 months ago

jdkent commented 6 months ago

article link: https://www.sciencedirect.com/science/article/pii/S0028393218300265?via%3Dihub

coordinate extracted by recent run of ACE: 10.0 48.0 38.0

article on neurosynth-compose: https://compose.neurosynth.org/base-studies/5SXcXCJzaNx6/3LhSKuCuFRkR

jdkent commented 5 months ago

from the recent scrape, there are only coordinates from the final table: https://academic.oup.com/cercor/article/11/9/796/294145?login=true

910 26.0 42.0 32.0 911 48.0 19.0 23.0 912 50.0 19.0 2.0 913 45.0 21.0 15.0

also only last table for this article: https://academic.oup.com/cercor/article/14/4/364/286415?login=true

2735 -11.0 -80.0 11.0 2736 -26.0 6.0 51.0 2737 -45.0 41.0 19.0 2738 45.0 24.0 26.0 2739 41.0 -45.0 44.0 2740 30.0 -74.0 45.0 2741 -45.0 -56.0 48.0 2742 -34.0 -79.0 39.0 2743 23.0 13.0 44.0 2744 -45.0 -17.0 36.0 2745 49.0 30.0 20.0 2746 -34.0 23.0 6.0 2747 -34.0 -42.0 37.0 2748 0.0 -28.0 29.0 2749 19.0 -37.0 -7.0 2750 -26.0 -34.0 -11.0 2751 -45.0 -9.0 -19.0 2752 45.0 -5.0 -19.0 2753 -30.0 -71.0 31.0 2754 -11.0 -32.0 12.0 2755 -8.0 -41.0 -20.0

coordinates extracted: https://www.sciencedirect.com/science/article/pii/S000689930801929X?via%3Dihub

12772 8.0 9.0 45.0 12773 6.0 10.0 11.0 12774 37.0 21.0 39.0 12775 8.0 42.0 34.0 12776 28.0 0.0 47.0 12777 56.0 26.0 13.0 12778 45.0 35.0 24.0

looks like this could have mixed up brodmanns areas with coordinates