Nextclade datasets

This repository contains Nextclade datasets and tools to maintain them.

Documentation:

• Create a new dataset - this guide explains how to create a new dataset from scratch.

• Add dataset to Nextclade - if you have a dataset and want to contribute it to the Nextclade official dataset collection.

• Nextclade dataset server maintenance guide - if you are maintainer of the official Nextclade dataset server or want to deploy your own dataset sever.

See also the docs/ subdirectory.

Additional links:

• Nextclade Web v3
• Nextclade Web v2 - if you need the old version
• Nextclade user documentation - for detailed instructions on how to use Nextclade Web and Nextclade CLI
• Nextclade source code repository - for contributors to Nextclade software (code, bug reports, feature requests etc.)
• Nextstrain discussion forum - for general discussion and questions