Singularity container / Biocontainer

nf-core / drugresponseeval

Pipeline for testing drug response prediction models in a statistically and biologically sound way.

MIT License

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Open JudithBernett opened 5 months ago

JudithBernett commented 5 months ago

Make containers and integrate them into the pipeline

JudithBernett commented 2 months ago

I made wave containers, but they are only available for one architecture (https://community.seqera.io/t/platform-specificity/1116).

Docker ARM64 build: 'community.wave.seqera.io/library/pip_drevalpy:23d68e736486ab16'
Docker AMD64 build: 'community.wave.seqera.io/library/pip_drevalpy:7d8f30cda5f4887b'
Singularity AMD64 build: 'oras://community.wave.seqera.io/library/pip_drevalpy:6ca244fae0c2fa29'

Making a biocontainer now