+TITLE: Server Setup

• For Ubuntu-18.04 server

• GENERAL

+BEGIN_SRC

apt update apt install sudo vim tmux -y

+END_SRC

• RCLONE

  +BEGIN_SRC

  curl https://rclone.org/install.sh | sudo bash

  +END_SRC

• DOCKER

+BEGIN_SRC

sudo apt-get remove docker docker-engine docker.io sudo apt install docker.io -y sudo systemctl start docker sudo systemctl enable docker sudo usermod -aG docker ${USER} su - ${USER}

for confirmation

id -nG

docker run hellow-world

+END_SRC

• CONDA

+BEGIN_SRC

wget https://repo.anaconda.com/miniconda/Miniconda3-py37_4.8.3-Linux-x86_64.sh

bash ./Miniconda3-py37_4.8.3-Linux-x86_64.sh rm ./Miniconda3-py37_4.8.3-Linux-x86_64.sh

exec $SHELL

+END_SRC

+BEGIN_SRC

conda config --add channels defaults conda config --add channels bioconda conda config --add channels conda-forge

+END_SRC

+BEGIN_SRC

conda create --name py37 python=3.7 -y conda create --name py27 python=2.7 -y

+END_SRC

• NEXTFLOW

+BEGIN_SRC

installs java-11 by default

conda install nextflow openjdk=11.0.1 -y

+END_SRC