iHMP Data Exploration - Githubissues

nih-cfde / 2022-may-hackathon

https://nih-cfde.github.io/2022-may-hackathon/

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iHMP Data Exploration #10

Open raynamharris opened 2 years ago

raynamharris commented 2 years ago

This session will involve getting Human Microbiome Project (HMP) data off of the CFDE Portal and working in the cloud using Amazon Web Services. Participants will be provided with an Amazon Web Services account and do basic bioinformatics analysis with sequencing data. Familiarity with UNIX is required.

Links:

raynamharris commented 2 years ago

Notes: https://hackmd.io/RUOcXf9BS32bYDvAZSdGDA

jessicalumian commented 2 years ago

Lesson materials and helpful links from today: https://hackmd.io/dW9EoOh3T42eed9q21NLJQ?view

Documentation for software install on AWS Jupyter notebooks: https://hackmd.io/rrjnYcZ3QemfuDpt82oomw

ctb commented 2 years ago

Video runthrough of the whole tutorial (20 minutes): https://www.loom.com/share/72bfbe40d47c43d8ac71a1923ac15a22

ctb commented 2 years ago

loom video hosted at video.ucdavis.edu: https://video.ucdavis.edu/media/t/1_yze086oo