nimh-dsst osm_cli issues

nimh-dsst / osm_cli

OpenSciMetrics (OSM) applies NLP and LLM-based metrics and indicators related to transparency, data sharing, rigor, and open science on biomedical publications.

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6.1 Set up GitHub CI/CD to run tests automatically

#22 gitstart-nimhdsst opened 5 days ago
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NIMH-8 - Section 2.2 PDF to XML, Setup custom docker file to bake in ScienceBeam Parser

#21 gitstart-app[bot] opened 5 days ago
2
NIMH-7 - 2.1 PDF to XML Conversion, ScienceBeam Parser

#20 gitstart-app[bot] opened 6 days ago
0
NIMH-6 - 1.4 PDF Input Handling, Set up GitHub CI/CD to run tests automatically

#19 gitstart-app[bot] closed 6 days ago
0
Reorganize and amend example inputs and outputs

#18 agt24 closed 1 week ago
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5.2 Set up Docker volume mappings to handle the PDF input and JSON output

#17 agt24 opened 1 week ago
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5.1 Create a Dockerfile that specifies the Python environment, dependencies, and the command to run the application.

#16 agt24 opened 2 weeks ago
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4.3 Ensure the file is written to a specified or default output directory

#15 agt24 opened 2 weeks ago
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4.2 Use Python’s JSON library to create a JSON file that includes bibliometric indicators and metadata.

#14 agt24 opened 2 weeks ago
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4.1 Setup git tags for semantic application versioning.

#13 agt24 opened 2 weeks ago
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3.3 Transform received data into a suitable format for output

#12 agt24 opened 2 weeks ago
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3.2 Interface with the transparent Docker container or API to send the XML and receive the extracted data

#11 agt24 opened 2 weeks ago
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NIMH-2 - 1.2 PDF Input Handling, Add rich text logging and pytest support

#10 gitstart-app[bot] closed 2 weeks ago
0
Section 3.1 Indicator Extraction, Integrate and Setup subprocess to interact with an R script, rtransparent

#9 agt24 opened 3 weeks ago
2
Section 2.2 PDF to XML, Setup custom docker file to bake in ScienceBeam Parser

#8 agt24 opened 3 weeks ago
1
2.1 PDF to XML Conversion, ScienceBeam Parser

#7 agt24 opened 3 weeks ago
1
1.4 PDF Input Handling, Set up GitHub CI/CD to run tests automatically

#6 agt24 opened 3 weeks ago
1
NIMH-3 - 1.3 PDF Input Handling, Add tox support to enable cross-language version testing.

#5 gitstart-app[bot] closed 2 weeks ago
0
NIMH-1 - 1.1 PDF Input Handling, setup click library to parse command line args

#4 gitstart-app[bot] closed 3 weeks ago
0
1.3 PDF Input Handling, Add tox support to enable cross-language version testing.

#3 agt24 closed 2 weeks ago
1
1.2 PDF Input Handling, Add rich text logging and pytest support

#2 agt24 closed 2 weeks ago
1
1.1 PDF Input Handling, setup click library to parse command line args

#1 agt24 closed 2 weeks ago
1