Serology reduction based on lgx

nmdp-bioinformatics / py-ard

HLA ARD Reduction in Python

https://py-ard.org/

GNU Lesser General Public License v3.0

17 stars 13 forks source link

Serology reduction based on lgx #305

Closed pbashyal-nmdp closed 9 months ago

pbashyal-nmdp commented 9 months ago

Use lgx version of Serology mapping for 2 field Alleles

Previously allele lookup was based on allele being present in the serology->dna mapping. This failed for alleles that reduced to a different allele. Updated to use lgx mapping when using 2 field alleles. DRB1*07:34, DRB1*07:34:01 and DRB1*07:34:02 will all map to DR7.

Fixes #290