Open Alexamk opened 5 years ago
nselem
commented
4 years ago Hello Sorry I have just seen the messages, you may inside the docker try to run only the draw script using the inputs files and removing the empty _.input. Let me know if this works. But anyway Im going to trace the problem
nselem
commented
4 years ago 3_Draw.pl 85000 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/home/output/query.fasta-output query.fasta
Hello,
I've recently started to use CORASON to find some homologous gene clusters in distant organisms. Unfortunately, the SVG files of the clusters are not being created, only the SVG file of the tree is found. This problem only shows up when I use a low E-value cutoff (1E-5), not with a stricter cutoff (1E-15). I've attached the full output of what I see when I run the program. There's various errors and warnings in there, but it seems to me that when the program tries to draw the clusters (log line nr. 1869), it tries to draw from the file _.input, which looks like it failed to get the right genome and gene cluster numbers for a particular file.
If you need more info, let me know.
log.log