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obophenotype / upheno

The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
https://obophenotype.github.io/upheno/
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Should SSPOs be released with their Uberon/CL alignments? #812

Open matentzn opened 2 years ago

matentzn commented 2 years ago

Species-specific phenotype ontologies like ZP, PLANP and XPO all come with links referring to their very own anatomy ontologies. This means that strictly speaking, as you analyse them with upheno pattern matchers they will never quite match. Would it make sense to extend these ontologies to align with Uberon and CL out of the Box? I believe so, and the way this would be realised is to simply to:

@dosumis what do you think? I can take that on for XPO, ZP, Wbphenotype and PLANP, I think these are the main ones.

matentzn commented 2 years ago

@dosumis suggests to implement this as a separate release artefacts.