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olgarithmics / ICLR_CAMIL

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run.py error #2

Open susuhu opened 2 months ago

susuhu commented 2 months ago

I got this error when trying run.py ValueError: Cannot apply softmax to a tensor that is 1D. Received input: Tensor("encoder/alpha/Reshape:0", shape=(None,), dtype=float32) Is it a Keras, Tensorflow version issue? Can you please provide the tensorflow environment details? Thank you.

olgarithmics commented 2 months ago

Hi Su,

We are using Keras integrated within TensorFlow 2.6 as tf.keras. Please avoid using standalone Keras if you're working with TensorFlow 2.6. I am also sending you the YAML file to reproduce the environment we used. Please let me know if it worked.

From: Su @.> Sent: 26 August 2024 10:44 To: olgarithmics/ICLR_CAMIL @.> Cc: Subscribed @.***> Subject: [olgarithmics/ICLR_CAMIL] run.py error (Issue #2)

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I got this error when trying run.py ValueError: Cannot apply softmax to a tensor that is 1D. Received input: Tensor("encoder/alpha/Reshape:0", shape=(None,), dtype=float32) Is it a Keras, Tensorflow version issue? Can you please provide the tensorflow environment details? Thank you.

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susuhu commented 2 months ago

Hi Olga,

Thanks for the reply. I haven't received tf YAML file yet. Where did you send it?

Best, Su

olgarithmics commented 2 months ago

Hi,

The yml file was part of my initial commit. It is called alma.yml

From: Su @.> Sent: 01 September 2024 13:28 To: olgarithmics/ICLR_CAMIL @.> Cc: Olga Fourkioti @.>; Comment @.> Subject: Re: [olgarithmics/ICLR_CAMIL] run.py error (Issue #2)

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Hi Olga,

Thanks for the reply. I haven't received tf YAML file yet. Where did you send it?

Best, Su

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susuhu commented 2 months ago

oh right! thanks!

susuhu commented 2 months ago

The code runs now. But could you also provide the instruction for tumor localization please? Thanks!