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napari-ome-zarr
A napari plugin for zarr backed OME-NGFF images
https://www.napari-hub.org/plugins/napari-ome-zarr
BSD 3-Clause "New" or "Revised" License
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viewer.add_labels crashes napari 0.5.3 on Mac M1
#119
mathieuboudreau
closed
3 weeks ago
1
Multiscale ome zarr support
#118
derekthirstrup
opened
2 months ago
1
Fix single channel name logic
#117
dstansby
opened
2 months ago
0
Unskip QT tests on linux/windows
#116
dstansby
opened
2 months ago
0
Add tests on Python 3.12
#115
dstansby
opened
2 months ago
0
Exclude bad version of ome-zarr
#114
dstansby
closed
2 months ago
0
use the qapp fixture and `qapp.processEvents()`
#113
joshmoore
opened
2 months ago
0
Drop color key
#112
will-moore
closed
2 months ago
5
Compatibility with latest ome-zarr-py
#111
ziw-liu
closed
2 months ago
2
cap numpy to less than 2
#110
jburel
closed
2 months ago
3
Labels layers don't load with napari 0.5.0 (dev)
#109
psobolewskiPhD
closed
2 months ago
10
Tests fail with ome-zarr 0.8.3
#108
dstansby
closed
2 months ago
4
Clean up GitHub actions config
#107
dstansby
opened
4 months ago
1
Can't open zarr contains which contains any other than the expected files
#106
tibuch
closed
5 months ago
1
Not clear if plugin reads whole dataset into memory?
#105
dstansby
closed
2 months ago
1
Can't open Zarr files with labels
#104
FIrgolitsch
closed
3 months ago
2
Error at reading demo file
#103
aloboa
closed
7 months ago
4
Duplicated layers loaded with s3fs & fsspec 2023.12.2
#102
jluethi
closed
2 months ago
2
Writing Labels
#101
FIrgolitsch
opened
8 months ago
0
Converting image to labels
#100
FIrgolitsch
closed
8 months ago
1
issues with loading labels data with this plugin
#99
jni
opened
8 months ago
10
Open data from existing group?
#98
rabernat
opened
8 months ago
4
Add OME-NGFF link to README
#97
dstansby
closed
2 months ago
1
Add Python 3.11 support
#96
dstansby
closed
9 months ago
1
Support for N5 drag and drop
#95
martlj
opened
11 months ago
2
Error loading HCS plates from S3
#94
elyall
closed
11 months ago
2
[pre-commit.ci] pre-commit autoupdate
#93
pre-commit-ci[bot]
opened
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#92
pre-commit-ci[bot]
closed
1 year ago
1
Plugin opens image, but does not display data (everything is 0); SOLVED: must use "/" dimension separator.
#91
GFleishman
closed
1 year ago
3
right click on layer menu is broken
#90
d-v-b
opened
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#89
pre-commit-ci[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#88
pre-commit-ci[bot]
closed
1 year ago
1
Fix build
#87
jburel
closed
1 year ago
2
no registered plugin named 'napari-ome-zarr'
#86
will-moore
closed
1 month ago
4
Handle AnnData regions tables
#85
will-moore
opened
1 year ago
16
Problems opening a 384 well-plate
#84
tibuch
opened
1 year ago
2
Remove usage of twine
#83
jburel
closed
1 year ago
2
Update action
#82
jburel
closed
1 year ago
2
Read anndata as napari points and tracks
#81
will-moore
closed
11 months ago
3
Layer name only contains first character from a multi-scale 2D image
#80
andy-sweet
opened
1 year ago
0
omero metadata info used in napari
#79
giovp
opened
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#78
pre-commit-ci[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#77
pre-commit-ci[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#76
pre-commit-ci[bot]
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#75
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#74
pre-commit-ci[bot]
closed
1 year ago
0
Support coordinateTransformations on multiscales v0.4
#73
will-moore
opened
1 year ago
0
Adjust README
#72
pwalczysko
closed
1 year ago
1
Support bioformats2raw.layout
#71
will-moore
opened
1 year ago
8
[pre-commit.ci] pre-commit autoupdate
#70
pre-commit-ci[bot]
closed
1 year ago
3
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