Enhancing Openness in the Prediction of Bacterial Pathogens in Yellowing Disease of Coastal Kenyan Coconuts through Machine Learning

adolfmukama commented 1 week ago

Project Lead:

Fatma Omar

Github username: @Fatma366

Team Member(s):

Adolf Oyesigye Mukama

Github username: @adolfmukama

Mentor:

Sebastián Ayala Ruano

Github username: _____

Keep everything below and click 'Submit new issue' --->

Welcome to OLS-7! This issue will be used to track your project and progress during the program. Please use this checklist over the next few weeks as you start Open Life Science program :tada:.

Week 1: Meet your mentor!

[x] Meet mentor for 30 minutes
[x] Create an account on GitHub
[x] Check if you have access to the HackMD notes set up for your meetings with your mentor
[x] Prepare to meet your mentor(s) by completing a short homework provided in your shared notes
[x] Complete your own copy of the open leadership self-assessment and share it to your mentor If you're a group, each teammate should complete this assessment individually. This is here to help you set your own personal goals during the program. No need to share your results, but be ready to share your thoughts with your mentor.
[x] Make sure you know when and how you'll be meeting with your mentor.

Before Week 2: Cohort Call (Welcome to Open Life Science!)

[x] Attend call or catch up via YouTube
[x] Create an issue on the OLS-9 GitHub repository for your OLS work and share the link to your mentor.
[x] Draft a brief vision statement using your goals

This lesson from the Open Leadership Training Series (OLTS) might be helpful
[x] Leave a comment on this issue with your draft vision statement & be ready to share this on the call
[x] Check the Syllabus for notes and connection info for all the cohort calls.

Before Week 3: Meet your mentor!

[x] Meet mentor
[ ] Look up two other projects and comment on their issues with feedback on their vision statement
[x] Complete this compare and contrast assignment about current and desired community interactions and value exchanges
[ ] Complete your Open Canvas (instructions, canvas)
[ ] Share a link to your Open Canvas in your GitHub issue
[ ] Start your Roadmap
[ ] Comment on your issue with your draft Roadmap
[ ] Suggest a cohort name at the bottom of the shared notes and vote on your favourite with a +1

Before Week 4: Cohort Call (Tooling and road mapping for Open projects)

[ ] Attend call or catch up via YouTube
[ ] Look up two other projects and comment on their issues with feedback on their open canvas.

Week 5 and later

[ ] Meet mentor
[ ] Create a GitHub repository for your project
[ ] Add the link to your repository in your issue
[ ] Use your canvas to start writing a README.md file, or landing page, for your project
[ ] Link to your README in a comment on this issue
[ ] Add an open license to your repository as a file called LICENSE.md
[ ] Add a Code of Conduct to your repository as a file called CODE_OF_CONDUCT.md
[ ] Invite new contributors to your work!

This issue is here to help you keep track of work as you start Open Life Science program. Please refer to the OLS-9 Syllabus for more detailed weekly notes and assignments past week 4.

Week 6

[ ] Attend call or catch up via YouTube
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 7

[ ] Meet mentor
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 8

[ ] Attend call or catch up via YouTube
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 9

[ ] Meet mentor
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 10

[ ] Attend call or catch up via YouTube
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 11

[ ] Meet mentor
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 12

[ ] Attend call or catch up via YouTube
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 13

[ ] Meet mentor
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 14

[ ] Attend call or catch up via YouTube
Comment below to share your progress and link to resources for review with your peers and mentors below

Week 15

[ ] Meet mentor
[ ] Celebrate your participation!
[ ] Share your presentation on Zenodo and share the link in the comment!
[ ] Graduate! 🎓

adolfmukama commented 5 days ago

Our vision statement

We are working with our mentor Sebastián Ayala Ruano Utilizing the power of machine learning models like Cat boost, to revolutionize the detection and classification of genetic variants in bacteria colonizing yellowing diseases in coconut palms along the Kenyan coast.

This research addresses the critical problem of accurately identifying these pathogens and assessing their diversity, ultimately contributing to effective disease control measures. Openness and open leadership, fostering collaboration and knowledge-sharing will all provide a dynamic research environment where diverse perspectives converge to harness the full potential of machine learning in agricultural pathology. Advancing our expertise in machine learning will help make meaningful contributions to the scientific community hence enhance our ability to address complex challenges posed by bacterial pathogens in coconuts. Our cultural goals for the community, organization, and project are intrinsically linked to problem-solving. Fostering inclusivity for a supportive ecosystem through a strong cultural foundation that promotes a resilient and sustainable agricultural landscape.

adolfmukama commented 5 days ago

Our open Canvas https://docs.google.com/presentation/d/129N8l2IWl8IL5ABK0ntLpVNxMWJdc89P/edit?usp=drive_link&ouid=106542123715874705972&rtpof=true&sd=true

open-life-science / ols-9