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[PRE REVIEW]: pyMechT: A Python package for mechanics of soft tissues #7295

Open editorialbot opened 4 days ago

editorialbot commented 4 days ago

Submitting author: !--author-handle-->@ankushaggarwal<!--end-author-handle-- (Ankush Aggarwal) Repository: https://github.com/ankushaggarwal/pymecht Branch with paper.md (empty if default branch): paper Version: v1.1.2 Editor: !--editor-->@Kevin-Mattheus-Moerman<!--end-editor-- Reviewers: Pending Managing EiC: Kevin M. Moerman

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editorialbot commented 4 days ago

Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

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For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@editorialbot generate pdf
editorialbot commented 4 days ago 
Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

✅ OK DOIs

- 10.1016/j.cma.2022.115812 is OK
- 10.1016/j.jmbbm.2023.105657 is OK

🟡 SKIP DOIs

- No DOI given, and none found for title: Heterogeneity and multi-scale modeling in vascular...

❌ MISSING DOIs

- None

❌ INVALID DOIs

- None
editorialbot commented 4 days ago

Software report:

github.com/AlDanial/cloc v 1.90  T=0.05 s (1036.5 files/s, 207299.3 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
SVG                              6              5              5           3056
Python                          16            551            980           2294
Jupyter Notebook                 3              0           1447            203
reStructuredText                12             76             98            196
Markdown                         2             52              0            174
YAML                             4             19             44             86
TeX                              1              2              0             28
DOS Batch                        1              8              1             26
TOML                             1              4              8             17
make                             1              4              7              9
-------------------------------------------------------------------------------
SUM:                            47            721           2590           6089
-------------------------------------------------------------------------------

Commit count by author:

   209  Ankush Aggarwal
    23  r-williams-2
    18  Ross Williams
     3  rosnelclaire
     1  ankushaggarwal
editorialbot commented 4 days ago

Paper file info:

📄 Wordcount for paper.md is 1404

✅ The paper includes a Statement of need section

editorialbot commented 4 days ago

License info:

✅ License found: MIT License (Valid open source OSI approved license)

editorialbot commented 4 days ago

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

editorialbot commented 4 days ago

Five most similar historical JOSS papers:

pyomeca: An Open-Source Framework for Biomechanical Analysis Submitting author: @romainmartinez Handling editor: @Kevin-Mattheus-Moerman (Active) Reviewers: @BKillen05, @mitkof6 Similarity score: 0.7558

biorbd: A C++, Python and MATLAB library to analyze and simulate the human body biomechanics Submitting author: @pariterre Handling editor: @trallard (Retired) Reviewers: @trallard, @abhishektha Similarity score: 0.7469

Tyssue: an epithelium simulation library Submitting author: @glyg Handling editor: @pdebuyl (Active) Reviewers: @fcooper8472, @SergeDmi Similarity score: 0.7402

GIBBON: The Geometry and Image-Based Bioengineering add-On Submitting author: @Kevin-Mattheus-Moerman Handling editor: @cMadan (Retired) Reviewers: @siboles Similarity score: 0.7367

BasicTools: a numerical simulation toolbox Submitting author: @fbordeu Handling editor: @diehlpk (Active) Reviewers: @hvonwah, @sthavishtha Similarity score: 0.7337

⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.

Kevin-Mattheus-Moerman commented 4 days ago

@ankushaggarwal Dear author, thanks for this submission. I am the AEiC on this track and here to help process the initial steps. Before we proceed, please can you have a look at the following points:

Kevin-Mattheus-Moerman commented 4 days ago

I'll assign myself as editor as soft tissue biomechanics is part of my expertise, and other editors in this domain are currently busy handling other submissions. So I will be the editor responsible for finding reviewers here and you can address me if you have any questions.

Kevin-Mattheus-Moerman commented 4 days ago

@editorialbot assign me as editor

editorialbot commented 4 days ago

Assigned! @Kevin-Mattheus-Moerman is now the editor

ankushaggarwal commented 4 days ago

@ankushaggarwal Dear author, thanks for this submission. I am the AEiC on this track and here to help process the initial steps. Before we proceed, please can you have a look at the following points:

* [ ]  Please spell out UK as United Kingdom in your affiliations.

@Kevin-Mattheus-Moerman Sure, I have updated this.

Kevin-Mattheus-Moerman commented 13 hours ago

@editorialbot generate pdf

editorialbot commented 13 hours ago

:point_right::page_facing_up: Download article proof :page_facing_up: View article proof on GitHub :page_facing_up: :point_left:

editorialbot commented 13 hours ago

Five most similar historical JOSS papers:

pyomeca: An Open-Source Framework for Biomechanical Analysis Submitting author: @romainmartinez Handling editor: @Kevin-Mattheus-Moerman (Active) Reviewers: @BKillen05, @mitkof6 Similarity score: 0.7504

GIBBON: The Geometry and Image-Based Bioengineering add-On Submitting author: @Kevin-Mattheus-Moerman Handling editor: @cMadan (Retired) Reviewers: @siboles Similarity score: 0.7428

biorbd: A C++, Python and MATLAB library to analyze and simulate the human body biomechanics Submitting author: @pariterre Handling editor: @trallard (Retired) Reviewers: @trallard, @abhishektha Similarity score: 0.7424

BasicTools: a numerical simulation toolbox Submitting author: @fbordeu Handling editor: @diehlpk (Active) Reviewers: @hvonwah, @sthavishtha Similarity score: 0.7394

Tyssue: an epithelium simulation library Submitting author: @glyg Handling editor: @pdebuyl (Active) Reviewers: @fcooper8472, @SergeDmi Similarity score: 0.7376

⚠️ Note to editors: If these papers look like they might be a good match, click through to the review issue for that paper and invite one or more of the authors before considering asking the reviewers of these papers to review again for JOSS.