osmart / hole2

Source code for HOLE program.
http://www.holeprogram.org
Apache License 2.0
30 stars 10 forks source link

sos_triangle core dumps for solid surface generation of big system #15

Open Augustus26 opened 7 months ago

Augustus26 commented 7 months ago

I am getting an error while generating solid surface which says- ERROR:Maximum number of co-ordinates exceeded! Program TERMINATED I am sharing a screenshot for reference. Screenshot from 2024-04-06 18-20-35

Please help me regarding this. Thank you

orbeckst commented 7 months ago

You can try increasing MAX_COORD in https://github.com/osmart/hole2/blob/7259d8f488e360d90377d3397a56e57c262793d7/src/sos_triangle.c#L28-L33 and recompile yourself.

Augustus26 commented 7 months ago

Thank you for your response Sir. I'll try to increase the coordinates count

orbeckst commented 7 months ago

Please let us know if the proposed change addresses your problem!

Augustus26 commented 7 months ago

Sir, now I think program is able to read the coordinates as I have increased the MAX_COORD but I still facing issue while generating "solid_surface.vmd_plot" file. I am sharing the screenshot for your reference Screenshot from 2024-04-18 16-36-30

Sir, I am still in need of your assistance as I am lacking in programming skills to figure out this error related to "segmentation-fault (core-dumped)" on my own

orbeckst commented 7 months ago

I am sorry that the program is crashing.

I am unfortunately not in a position to help here — HOLE is not my program and I don't have the time to debug the code.

If this is really important to your own work, I encourage you to learn more programming and fix it yourself and then contribute your fix back — after all, that's what open source software is about.

Augustus26 commented 7 months ago

Thank you Sir. I'll try what I can do on my part and update if I am able to resolve the issue

Augustus26 commented 7 months ago

Sir, I am extremely sorry to bother you again but I want to bring in light another issue I face while using "qpt_conv" command. Despite hitting enter three times. Nothing seems to happen. I had to exit manually Screenshot from 2024-04-20 09-52-06

orbeckst commented 7 months ago

I would open a new issue because you're having issues with qpt_conv.

I have no idea what could be the problem but at least if you create an issue specific for the problem then there's a chance that someone may see it.

(I wrote a short post about posting issues and questions at https://github.com/MDAnalysis/mdanalysis/discussions/4558 which may be helpful.)

orbeckst commented 7 months ago

I am going to leave this issue open for now.