MitchellShiell
commented
2 weeks ago Update
Added the following to my table.json located at /configurationFiles/arrangerConfigs/
{
"table": {
"rowIdFieldName": "id",
"columns": [
{
Note, _id does not work
Payload
However the issue persists
The payload on download is as follows notice that id is null:
{
"fileName": "",
"files": [
{
"documentType": "file",
"fileName": "correlation-data-export.20241114.tsv",
"fileType": "tsv",
"maxRows": 0,
"sqon": {
"op": "and",
"content": [
{
"op": "in",
"content": {
"fieldName": "file_autocomplete",
"value": [
"100___",
"108___",
"10___",
"12___",
"15___"
]
}
}
]
},
"columns": [
{
"accessor": "Projectcode",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Project Code",
"displayType": "keyword",
"displayValues": {},
"fieldName": "Projectcode",
"id": null,
"isArray": false,
"jsonPath": "$.Projectcode",
"query": "Projectcode",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "A",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Gene A",
"displayType": "keyword",
"displayValues": {},
"fieldName": "A",
"id": null,
"isArray": false,
"jsonPath": "$.A",
"query": "A",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "B",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Gene B",
"displayType": "keyword",
"displayValues": {},
"fieldName": "B",
"id": null,
"isArray": false,
"jsonPath": "$.B",
"query": "B",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "Spearmancorr",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Spearman Correlation",
"displayType": "scaled_float",
"displayValues": {},
"fieldName": "Spearmancorr",
"id": null,
"isArray": false,
"jsonPath": "$.Spearmancorr",
"query": "Spearmancorr",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "Spearmanp",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Spearman P Value",
"displayType": "scaled_float",
"displayValues": {},
"fieldName": "Spearmanp",
"id": null,
"isArray": false,
"jsonPath": "$.Spearmanp",
"query": "Spearmanp",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "Pearsoncorr",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Pearson Correlation",
"displayType": "scaled_float",
"displayValues": {},
"fieldName": "Pearsoncorr",
"id": null,
"isArray": false,
"jsonPath": "$.Pearsoncorr",
"query": "Pearsoncorr",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "Pearsonp",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Pearson P Value",
"displayType": "scaled_float",
"displayValues": {},
"fieldName": "Pearsonp",
"id": null,
"isArray": false,
"jsonPath": "$.Pearsonp",
"query": "Pearsonp",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "Spearmancorrsquare",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Spearman Correlation Square",
"displayType": "scaled_float",
"displayValues": {},
"fieldName": "Spearmancorrsquare",
"id": null,
"isArray": false,
"jsonPath": "$.Spearmancorrsquare",
"query": "Spearmancorrsquare",
"show": true,
"sortable": true,
"type": null
},
{
"accessor": "Pearsoncorrsquare",
"canChangeShow": true,
"displayFormat": null,
"displayName": "Pearson Correlation Square",
"displayType": "scaled_float",
"displayValues": {},
"fieldName": "Pearsoncorrsquare",
"id": null,
"isArray": false,
"jsonPath": "$.Pearsoncorrsquare",
"query": "Pearsoncorrsquare",
"show": true,
"sortable": true,
"type": null
}
]
}
]
}GraphQL
Confirmation that Id exists in graphQL:
Query
query File {
file {
hits {
edges {
node {
id
}
}
}
}
}Response
[
{
"node.id": "100___"
},
{
"node.id": "108___"
},
{
"node.id": "10___"
},
{
"node.id": "112___"
},
{
"node.id": "114___"
},
{
"node.id": "115___"
},
{
"node.id": "121___"
},
{
"node.id": "123___"
},
{
"node.id": "124___"
},
{
"node.id": "126___"
}
]
Summary
Selecting records from the RepoTable creates a 0B download file
Description
I have download functionality for a multi-arranger stage working however when I add any selections in the RepoTable the download comes out as 0B. Facets filtering and downloading works as expected.
All changes can be viewed from the following commit: https://github.com/overture-stack/stage/commit/bf03b47af752ca3cbf98bf4bcb08ea5ba9ba3b41
Suspected Solution
I suspect some mismanaged state/context regarding the arranger-components, TableContextProvider/Table?
Also could use some insight on which of these are important vs being virusSeq Specific: https://github.com/virusseq/portal-ui/commit/b20e261ef2c7c6e44af6ada1ab25b26c40e32e98#diff-f81b59533eae79f2da6a075813e4bec1756fa44b21e7ac66a76dc756c6b1d961R32-R36
Reproducing the issue
See the readme here: https://github.com/oicr-softeng/drug_discovery-ui/