oxfordmmm / gnomonicus

Python code to integrate results of tb-pipeline and provide an antibiogram, mutations and variants
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To json #1

Closed JeremyWesthead closed 2 years ago

JeremyWesthead commented 2 years ago

Adds flag to the CLI to produce a single JSON output, as well as appropriate functions to perform this within the library, and additions to existing unit tests to ensure functionality.