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oxfordmmm / gnomonicus

Python code to integrate results of tb-pipeline and provide an antibiogram, mutations and variants
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Large deletions #12

Closed JeremyWesthead closed 1 year ago

JeremyWesthead commented 1 year ago

Added large deletion support Ensure VCF evidence flows through to the reports Doesn't try to simplify indels into 3 now

Requires gumpy:main git version NOT pypi currently, so tests will fail