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pangenome / pggb-workshop

tutorial on pggb
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failed to build on M1 mac #1

Open deannachurch opened 2 years ago

deannachurch commented 2 years ago

Hi- I tried to build on my M1 mac and got this error message

running in the pggb directory after cloning from git.

docker build --target binary -t ${USER}/pggb:latest .

executor failed running [/bin/sh -c git clone --recursive https://github.com/ekg/seqwish && cd seqwish && git pull && git checkout da0d2f0d81f1a3214ed34e2174bae73a0ea39296 && git submodule update --init --recursive && cmake -H. -DCMAKE_BUILD_TYPE=Generic -Bbuild && cmake --build build -- -j $(nproc) && cp bin/seqwish /usr/local/bin/seqwish && cd ../ && rm -rf seqwish]: exit code: 2

deannachurch commented 2 years ago

This is on Monterey v. 12.6